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1

Central Functions of the Lumenal and Peripheral Thylakoid Proteome of Arabidopsis Determined by Experimentation and Genome-Wide Prediction

Jean-Benoît Peltier, Olof Emanuelsson, Dário E. Kalume, Jimmy Ytterberg, Giulia Friso, Andrea Rudella, David A. Liberles, Linda Söderberg, Peter Roepstorff, Gunnar von Heijne and Klaas J. van Wijk

Journal:

Year:

2002

Language:

english

File:

PDF, 4.67 MB

english, 2002

2

Developmental and Subcellular Organization of Single-Cell C 4 Photosynthesis in Bienertia sinuspersici Determined by Large-Scale Proteomics and cDNA Assembly from 454 DNA Sequencing

Offermann, Sascha, Friso, Giulia, Doroshenk, Kelly A., Sun, Qi, Sharpe, Richard M., Okita, Thomas W., Wimmer, Diana, Edwards, Gerald E., van Wijk, Klaas J.

Journal:

Journal of Proteome Research

Year:

2015

Language:

english

File:

PDF, 2.45 MB

english, 2015

3

In vivo trapping of proteins interacting with the chloroplast CLPC1 chaperone; potential substrates and adaptors

Montandon, Cyrille, Friso, Giulia, Liao, Jui-Yun Rei, Choi, Junsik, van Wijk, Klaas J.

Journal:

Journal of Proteome Research

Year:

2019

Language:

english

File:

PDF, 2.05 MB

english, 2019

4

Constitutive expression of peaLhcb1–2in tobacco affects plant development, morphology and photosynthetic capacity

Mônica Labate, Kenton Ko, Zdenka Ko, Luciana Pinto, Maria Real, Marcelo Romano, Paulo Barja, Antonio Granell, Giulia Friso, Klaas Wijk, Enrico Brugnoli, Carlos Labate

Journal:

Plant Molecular Biology

Year:

2004

Language:

english

File:

PDF, 2.95 MB

english, 2004

5

The chloroplast ClpP complex in Chlamydomonas reinhardtii contains an unusual high molecular mass subunit with a large apical domain

Wojciech Majeran, Giulia Friso, Klaas Jan van Wijk, Olivier Vallon

Journal:

Year:

2005

Language:

english

File:

PDF, 597 KB

english, 2005

6

A scalable, GFP-based pipeline for membrane protein overexpression screening and purification

David Drew, Dirk-Jan Slotboom, Giulia Friso, Torsten Reda, Pierre Genevaux, Mikaela Rapp, Nadja M. Meindl-Beinker, Wietske Lambert, Mirjam Lerch, Daniel O. Daley, Klaas-Jan Van Wijk, Judy Hirst, Edmun

Journal:

Protein Science

Year:

2005

Language:

english

File:

PDF, 387 KB

english, 2005

7

Immobilization of the first dimension in 2D blue native/SDS–PAGE allows the relative quantification of membrane proteomes

Mirjam Klepsch, Susan Schlegel, David Wickström, Giulia Friso, Klaas J. van Wijk, Jan-Olov Persson, Jan-Willem de Gier, Samuel Wagner

Journal:

Year:

2008

Language:

english

File:

PDF, 383 KB

english, 2008

8

The purification of theChlamydomonas reinhardtiichloroplast ClpP complex: additional subunits and structural features

Derrien, Benoît, Majeran, Wojciech, Effantin, Grégory, Ebenezer, Joseph, Friso, Giulia, Wijk, Klaas J., Steven, Alasdair C., Maurizi, Michael R., Vallon, Olivier

Journal:

Plant Molecular Biology

Year:

2012

Language:

english

File:

PDF, 851 KB

english, 2012

9

The combined use of photoaffinity labeling and surface plasmon resonance-based technology identifies multiple salicylic acid-binding proteins

Tian, Miaoying, von Dahl, Caroline C., Liu, Po-Pu, Friso, Giulia, van Wijk, Klaas J., Klessig, Daniel F.

Journal:

The Plant Journal

Year:

2012

Language:

english

File:

PDF, 1.16 MB

english, 2012

10

Construction of Plastid Reference Proteomes for Maize and Arabidopsis and Evaluation of Their Orthologous Relationships; The Concept of Orthoproteomics

Huang, Mingshu, Friso, Giulia, Nishimura, Kenji, Qu, Xian, Olinares, Paul Dominic B., Majeran, Wojciech, Sun, Qi, van Wijk, Klaas J.

Journal:

Journal of Proteome Research

Year:

2013

Language:

english

File:

PDF, 1.99 MB

english, 2013

11

Real Time Traffic Models, Decision Support for Traffic Management

Wismans, Luc, de Romph, Erik, Friso, Klaas, Zantema, Kobus

Journal:

Procedia Environmental Sciences

Year:

2014

Language:

english

File:

PDF, 2.77 MB

english, 2014

12

MET1 Is a Thylakoid-Associated TPR Protein Involved in Photosystem II Supercomplex Formation and Repair in Arabidopsis

Bhuiyan, Nazmul H., Friso, Giulia, Poliakov, Anton, Ponnala, Lalit, van Wijk, Klaas J.

Journal:

Year:

2015

Language:

english

File:

PDF, 2.45 MB

english, 2015

13

Salicylic Acid Inhibits the Replication of Tomato bushy stunt virus by Directly Targeting a Host Component in the Replication Complex

Tian, Miaoying, Sasvari, Zsuzsanna, Gonzalez, Paulina Alatriste, Friso, Giulia, Rowland, Elden, Liu, Xiao-Min, van Wijk, Klaas J., Nagy, Peter D., Klessig, Daniel F.

Journal:

Molecular Plant-Microbe Interactions

Year:

2015

Language:

english

File:

PDF, 1.63 MB

english, 2015

14

Structures, Functions, and Interactions of ClpT1 and ClpT2 in the Clp Protease System of Arabidopsis Chloroplasts

Kim, Jitae, Kimber, Matthew S., Nishimura, Kenji, Friso, Giulia, Schultz, Lance, Ponnala, Lalit, van Wijk, Klaas J.

Journal:

Year:

2015

Language:

english

File:

PDF, 1.72 MB

english, 2015

15

A Zinc Finger Motif-Containing Protein Is Essential for Chloroplast RNA Editing

Sun, Tao, Shi, Xiaowen, Friso, Giulia, Van Wijk, Klaas, Bentolila, Stephane, Hanson, Maureen R., Copenhaver, Gregory P.

Journal:

Year:

2015

Language:

english

File:

PDF, 3.14 MB

english, 2015

16

Discovery of a Unique Clp Component, ClpF, in Chloroplasts: A Proposed Binary ClpF-ClpS1 Adaptor Complex Functions in Substrate Recognition and Delivery

Nishimura, Kenji, Apitz, Janina, Friso, Giulia, Kim, Jitae, Ponnala, Lalit, Grimm, Bernhard, van Wijk, Klaas J.

Journal:

Year:

2015

Language:

english

File:

PDF, 1.57 MB

english, 2015

17

A Comprehensive Analysis of the 14-3-3 Interactome in Barley Leaves Using a Complementary Proteomics and Two-Hybrid Approach

Peter J. Schoonheim, Helena Veiga, Daniel da Costa Pereira, Giulia Friso, Klaas J. van Wijk and Albertus H. de Boer

Journal:

PLANT PHYSIOLOGY

Year:

2007

Language:

english

File:

PDF, 2.53 MB

english, 2007

18

Update: Post-translational protein modifications in plant metabolism

Friso, Giulia, van Wijk, Klaas Jan

Journal:

PLANT PHYSIOLOGY

Year:

2015

Language:

english

File:

PDF, 423 KB

english, 2015

19

Structural and Metabolic Transitions of C₄ Leaf Development and Differentiation Defined by Microscopy and Quantitative Proteomics in Maize

Wojciech Majeran, Giulia Friso, Lalit Ponnala, Brian Connolly, Mingshu Huang, Edwin Reidel, Cankui Zhang, Yukari Asakura, Nazmul H. Bhuiyan, Qi Sun, Robert Turgeon and Klaas J. van Wijk

Journal:

Year:

2010

Language:

english

File:

PDF, 6.81 MB

english, 2010

20

A Ribonuclease III Domain Protein Functions in Group II Intron Splicing in Maize Chloroplasts

Kenneth P. Watkins, Tiffany S. Kroeger, Amy M. Cooke, Rosalind E. Williams-Carrier, Giulia Friso, Susan E. Belcher, Klaas J. van Wijk and Alice Barkan

Journal:

Year:

2007

Language:

english

File:

PDF, 4.94 MB

english, 2007

21

Reconstruction of Metabolic Pathways, Protein Expression, and Homeostasis Machineries across Maize Bundle Sheath and Mesophyll Chloroplasts: Large-Scale Quantitative Proteomics Using the First Maize Genome Assembly

Giulia Friso, Wojciech Majeran, Mingshu Huang, Qi Sun and Klaas J. van Wijk

Journal:

PLANT PHYSIOLOGY

Year:

2010

Language:

english

File:

PDF, 7.82 MB

english, 2010

22

Quantitative Proteomics of a Chloroplast SRP54 Sorting Mutant and Its Genetic Interactions with CLPC1 in Arabidopsis

Heidi Rutschow, A. Jimmy Ytterberg, Giulia Friso, Robert Nilsson and Klaas J. van Wiik

Journal:

PLANT PHYSIOLOGY

Year:

2008

Language:

english

File:

PDF, 3.66 MB

english, 2008

23

In-Depth Analysis of the Thylakoid Membrane Proteome of Arabidopsis thaliana Chloroplasts: New Proteins, New Functions, and a Plastid Proteome Database

Giulia Friso, Lisa Giacomelli, A. Jimmy Ytterberg, Jean-Benoit Peltier, Andrea Rudella, Qi Sun and Klaas J. van Wijk

Journal:

Year:

2004

Language:

english

File:

PDF, 3.87 MB

english, 2004

24

APO1 Promotes the Splicing of Chloroplast Group II Introns and Harbors a Plant-Specific Zinc-Dependent RNA Binding Domain

Kenneth P. Watkins, Margarita Rojas, Giulia Friso, Klaas J. van Wijk, Jörg Meurer and Alice Barkan

Journal:

Year:

2011

Language:

english

File:

PDF, 2.20 MB

english, 2011

25

Phosphorylation of plastoglobular proteins in Arabidopsis thaliana

Lohscheider, Jens N., Friso, Giulia, van Wijk, Klaas J.

Journal:

Journal of Experimental Botany

Year:

2016

Language:

english

File:

PDF, 727 KB

english, 2016

26

Proteomics of the Chloroplast: Systematic Identification and Targeting Analysis of Lumenal and Peripheral Thylakoid Proteins

Jean-Benoît Peltier, Giulia Friso, Dário Eluan Kalume, Peter Roepstorff, Frederik Nilsson, Iwona Adamska and Klaas J. van Wijk

Journal:

Year:

2000

Language:

english

File:

PDF, 4.39 MB

english, 2000

27

ClpS1 Is a Conserved Substrate Selector for the Chloroplast Clp Protease System in Arabidopsis

Kenji Nishimura, Yukari Asakura, Giulia Friso, Jitae Kim, Soo-hyun Oh, Heidi Rutschow, Lalit Ponnala and Klaas J. van Wijk

Journal:

Year:

2013

Language:

english

File:

PDF, 5.82 MB

english, 2013

28

The Plastoglobule-Localized Metallopeptidase PGM48 is a Positive Regulator of Senescence in Arabidopsis thaliana

Bhuiyan, Nazmul H., Friso, Giulia, Rowland, Elden, Majsec, Kristina, van Wijk, Klaas Jan

Journal:

Year:

2016

Language:

english

File:

PDF, 3.52 MB

english, 2016

29

Extreme variation in rates of evolution in the plastid Clp protease complex

Williams, Alissa M., Friso, Giulia, van Wijk, Klaas J., Sloan, Daniel B.

Journal:

The Plant Journal

Year:

2018

Language:

english

File:

PDF, 1.33 MB

english, 2018

30

Consequences of the loss of catalytic triads in chloroplast CLPPR protease core complexes in vivo

Liao, Jui-Yun Rei, Friso, Giulia, Kim, Jitae, van Wijk, Klaas J.

Journal:

Year:

2018

Language:

english

File:

PDF, 2.37 MB

english, 2018

31

In vivo trapping of proteins interacting with the chloroplast CLPC1 chaperone; potential substrates and adaptors

Montandon, Cyrille, Friso, Giulia, Liao, Jui-Yun Rei, Choi, Junsik, van Wijk, Klaas J.

Journal:

Journal of Proteome Research

Year:

2019

File:

PDF, 2.05 MB

2019

32

Exploring the proteome associated with the mRNA encoding the D1 reaction center protein of Photosystem II in plant chloroplasts

Watkins, Kenneth P., Williams‐Carrier, Rosalind, Chotewutmontri, Prakitchai, Friso, Giulia, Teubner, Marlene, Belcher, Susan, Ruwe, Hannes, Schmitz‐Linneweber, Christian, van Wijk, Klaas J., Barkan, A

Journal:

The Plant Journal

Year:

2019

File:

PDF, 81.77 MB

2019

33

Auto-catalytic processing and substrate specificity of Arabidopsis chloroplast glutamyl peptidase

Bhuiyan, Nazmul H., Rowland, Elden, Friso, Giulia, Ponnala, Lalit, Michel, Elena JS, van Wijk, Klaas Jan

Journal:

PLANT PHYSIOLOGY

Year:

2020

File:

PDF, 3.52 MB

2020